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Five helpful learning resources to learn Gephi
Five helpful learning resources to learn Gephi
🎓Want to learn Gephi? Don’t think twice! I’m sharing five helpful learning resources ! 1.-Gephi Quick Start https://lnkd.in/gD6fPEJK 2.- Visualizing networks (Gephi) by Dr. Mathieu Jacomy https://lnkd.in/gwG_EtSb 3.-GEPHI – Introduction to Network Analysis and Visualization by Dr. Martin Grandjean https://lnkd.in/geeCDG4P 4.-Documentation for Gephi: core functions and plugins by Dr. Clément Levallois https://lnkd.in/gw6RPsrN 5.-Gephi Tutorials: Learning Resources for Everyone by Dr. Verónica Espinoza https://lnkd.in/gDq5XX-e _________ #Gephi #NetworkAnalysis #DataVisualization #NetworkVisualization #GraphTheory #DigitalMethods #ComputationalSocialScience #DataScience #OpenSourceTools #ResearchTools #SocialMedia #VisualAnalytics #ComplexNetworks #AcademicResearch
Want to learn Gephi? Don’t think twice! I’m sharing five helpful learning resources
¡linkedin.com¡
Five helpful learning resources to learn Gephi
Enhancing link prediction in biomedical knowledge graphs with BioPathNet - Nature Biomedical Engineering
Enhancing link prediction in biomedical knowledge graphs with BioPathNet - Nature Biomedical Engineering
Understanding how genes, proteins, diseases, and drugs interact is one of the biggest challenges in modern biomedicine. Traditional link‑prediction methods — from similarity metrics to node embeddings — often fall short when relationships span multiple hops or involve noisy, heterogeneous data. This new approach introduces BioPathNet, a powerful graph machine learning framework that pushes the boundaries of what’s possible in knowledge graphs.
¡nature.com¡
Enhancing link prediction in biomedical knowledge graphs with BioPathNet - Nature Biomedical Engineering
Semantic Data Modeling, Graph Query, and SQL, Together at Last?
Semantic Data Modeling, Graph Query, and SQL, Together at Last?

We're connecting some parallel threads on semantic modeling and graph query with our continued focus on making SQL easier to use.

Semantic modeling is about bringing higher-level business logic definitions into the database (rather than a layer above), so they can be queried directly with SQL. We use measure columns to solve double-counted aggregates. And we model the graph relationships (joins) in the schema, making it easy to express joins with just path traversals.

https://storage.googleapis.com/gweb-research2023-media/pubtools/1030704.pdf

Semantic Data Modeling, Graph Query, and SQL, Together at Last?
¡linkedin.com¡
Semantic Data Modeling, Graph Query, and SQL, Together at Last?
Context Graphs: A Tangled Web Of Confusion
Context Graphs: A Tangled Web Of Confusion
Context Graphs: A Tangled Web Of Confusion 🕸️ With Context Graphs, I'm having loads of great discussions (with a lot of awesome critique and feedback - love it, helps me learn) 🙏 But also I see a lot, trying to mis-classify the problem space by overlaying other graph based solutions onto this one. There seems to be confusion about the space we are operating in. So, with that in mind, I thought I'd go back to basics. State Machines - concepts: ⚙️ - States are (where you are and where you can possibly move to) - Transitions (how you move) - Events (what triggers movement) - Guards (conditions that allow or block) The system is always in one state. They have a possibility space i.e. from the current position (state). Various options exist (some known and some unknown - this is key), but the path between them isn't predefined. Using the information available (context) a decision is made, results in a move to a different state. i.e. What happens next determines where you go, (GPS - dynamic re-routing vs routes marked on a Map) The path emerges from execution but isn't known ahead of time. Workflows vs State Machines ⚖️ Workflows (including procedural knowledge approaches): are predefined sequences of steps, the path is predefined and decreed up front e.g. Step 1 → Step 2 → Step 3. All options are not only known but the sequence is typically defined up front (although can evolve- but not typically at run-time) Note: trying to make workflows dynamic is trying to fit a square peg in round hole, probably can engineer, but it's the wrong pattern Both valid but very different behaviours for different problem spaces! 🤖 Agent → Uses State Machines 🔧 Traditional automation → Typically uses workflows How Agents navigate State Machines They observe state (current goal or state in its execution process), evaluate options and choose the next state based on context (all info needed to make the decision), then execute and arrive at new state. Agents also operate in an unknown state space i.e. they can create new options as they go. This fundamentally breaks predefined flow approaches. 💡 This repeats. The path isn't scripted, it's discovered at runtime. Context Graphs: A context graph is the structure an agent navigates: - Current state - Available transitions - Execution history + All the decision and other information used to make the decision to the appropriate transition (judgment, decision criteria etc, the "context" used) It's live at runtime and persisted as decision trace when complete, with the accumulated traces becoming organisational memory. Why The Confusion? 🤔 Context graphs sit at the intersection of data, software, and AI. Each discipline sees it through their own lens. We can def debate if the graph is just a log (the FC Capital POV) or also moves into the actual execution (what we've built) but first we must acknowledge the fundamental problem space we are in. The terminology will sort itself out ✌️ Nebulyx AI | 37 comments on LinkedIn
Context Graphs: A Tangled Web Of Confusion
¡linkedin.com¡
Context Graphs: A Tangled Web Of Confusion
AI is exposing a missing representational layer in decision optimization — and Decision Traces help fill that gap.
AI is exposing a missing representational layer in decision optimization — and Decision Traces help fill that gap.
The missing step in Decision Intelligence — exposed by AI / Agentic Systems
AI is exposing a missing representational layer in decision optimization — and Decision Traces help fill that gap.
¡linkedin.com¡
AI is exposing a missing representational layer in decision optimization — and Decision Traces help fill that gap.
PKO documents how procedures meet reality. TQL structures how meaning becomes clear before procedures exist or are defined.
PKO documents how procedures meet reality. TQL structures how meaning becomes clear before procedures exist or are defined.
Wow, my post on ontologies, context graphs, and intent maps got a lot more interactions than I expected.
PKO documents how procedures meet reality.TQL structures how meaning becomes clear before procedures exist or are defined.
¡linkedin.com¡
PKO documents how procedures meet reality. TQL structures how meaning becomes clear before procedures exist or are defined.
GraphText: Graph Reasoning in Text Space
GraphText: Graph Reasoning in Text Space
Large Language Models (LLMs) have gained the ability to assimilate human knowledge and facilitate natural language interactions with both humans and other LLMs. However, despite their impressive...
¡arxiv.org¡
GraphText: Graph Reasoning in Text Space
Understanding the Real Role of Ontologies, Knowledge Graphs & AI | LinkedIn
Understanding the Real Role of Ontologies, Knowledge Graphs & AI | LinkedIn
Today, discussions about ontologies, semantic graphs, and knowledge graphs are often clouded by a semantic blur. Why? Because two fundamental levels are frequently confused: 1️⃣ Human interpretation Symbols (words, concepts, terms) gain meaning through our ability to link concepts to real-world refe
¡linkedin.com¡
Understanding the Real Role of Ontologies, Knowledge Graphs & AI | LinkedIn
Graph Landscape 2026
Graph Landscape 2026
#GraphLandscape2026 We’re starting the year with a fresh view of the graph landscape! After sharing our first version of the Graph Landscape 2026 back in November, we received great feedback from the community. Based on your input, we’ve decided to make additions, refinements, and adjustments — and created a brand new edition in PDF. This report reflects: 👉 emerging trends across the graph ecosystem 👉 evolving technologies and use cases 👉 new and maturing players shaping the market Happy reading! #Technology #GraphAnalytics #KnowledgeGraphs
Graph Landscape 2026
¡linkedin.com¡
Graph Landscape 2026